My latest addition to the PC farm would not run GPUs. Accordingly, my builder gave it a [legal] operating system transplant from one of my other machines.
My attempts to reset both machines to zero seems to have complicated the situation. I am happy to let BOINC work this stuff out on its own.
No shenanigans are going on. However, I plan one more multiple gpu build so the issue might come up again. I have a machine that will do four gpu cards. Cloning it is easier then any alternative.
Arecibo 19 Oct 2012
Just Because The Space Alien Is Green
Does Not Mean You Should Go
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Sometimes I wonder about your builder. I wouldn't worry about BOINC though. Make sure you change the computer name after cloning. You can uninstall BOINC completely and re-install if you like, or detach and reattach to your projects.